As far as the regs are concerned, in general there aren't any specific requirements for any supplementary bonding to be installed, provided that the conditions for automatic disconnection (in the event of a fault) are met, apart from what are defined as 'special locations', only one of which you are likely to encounter regularly as a heating engineer and that is bathrooms (well technically it's 'locations containing a bath or shower'). Generally if you ensure that the main equipotential bonding is in place and is mechanically and electrically sound (if it's been painted under the clamp it will almost certainly not be) and the bathroom has been bonded in accordance with BS7671:2001 (basically all metalic parts joined together with a conductor not less than 4sq.mm), then you're unlikely to have a problem. Main equipotential bonding should create an earthed equipotential 'zone' (the dwelling basicly), meaning that all exposed-conductive-parts ( basicly metallic parts of the electrical installation) and extraneous-conductive-parts (basicly metallic parts which are not part of the electrical installation such as pipework) within the installation (the building) are connected to the main earthing terminal. The supplementary bonding, as applied for example in bathrooms, is only required where it is necessary to ensure absolutely that all the metallic parts within that simaltaneously-accessible zone are to the same potential.
With regard to the plastic pipe issue, an extraneous conductive part as defined by the reg's is 'a conductive part liable to introduce a potential, generally earth potential, and not forming part of the electrical installation'. This is where you have a grey area and it's down to the descretion of those concerned with certifying the electrical or gas installation. A metallic window frame for example is not liable to introduce a potential (basicly meaning it's not liable to become live). In the case of a bathroom, you may have a metallic towel rail which is fed by two plastic pipes; the question is not just 'is it bonded?', but instead the question should be 'can it be described as an extraneous-conductive-part?'. I would argue that in most instances where it is supplied solely by plastic pipes then the answer is probably going to be no, in which case there is no need to bond it. If however a potential is likely to arise beteen that towel rail and another metallic part within that zone (if it has copper pipes for example), then it should certasinly be classed as an extraneous-conductive-part, and as such should be bonded.
Anyway...(deep breath!), coming back to your questions. People who are impressed to see cross bonding loops aross the boiler are almost certainly a little misguided. The chances are that if you removed those cross bonds between the pipes and tested between the pipes with a low-reading ohmmeter, the reading would probably be less than 0.05 ohms; so nothing has really been acheived by doing it, the pipes will proably already be at the same potential. The pipes may be connected together, but are they connected to the main earth terminal in any way? Maybe, maybe not but all that cross bonding is pointless unless it's actually doing a job. The best way to check if pipework is connected to the main earth terminal is with a low reading ohmmeter. Take a length of earth cable (4sq.mm will do fine), use your low reading ohmeter to measure it's resistance (remember it!), connect it to the main earth terminal and carry out resistance reading between to other endof your earth cable and your pipe. It can be easier to just carry a part used drum of 4mm earth around with you and just unroll it and roll it back on as you require, depending on how far the pipe is from the main earth terminal.
I wouldn't have thought though that would be within the scope of certifying a gas installation? I always thought that if the mainequipotential bonding conductor is all correct and present (present is one thing, but correct is another issue!) then you would have met your obligation of certifying the gas installation? Hope this has answered your questions and I may have made a few errors whilst typing so if you need any of my points clarified or if you need reg numbers let me know.