The EP2002 cannot repace the EP2000 on gravity system because the heating & hot water systems ARE independant, in the EP2000 CH & HW times are the same, so the heating only on the EP2002 will not bring on the boiler.
May I suggest the following.
1. Buy a 2-gang surface mounted pattress (double socket box) to use as a terminal box. This is because the EP2000 terminals A, B, C, &D are just terminals for your convenience, not connected internally, the same for the N and E terminal blocks.
2. Wire the N & E wires to the new terminal block, and the A, B, C, & D likewise.
3. Terminal 5 on the EP2000 is the common and is usually linked directly to L, the new Honeywell controller has this internally linked, so all wires from 5 go straight to the L terminal.
4. Connect N & L to the new programmer base, screwed to the pattress, the old terminals 1, 3, and 4 are the same so should be a straight swap.
Finally make sure you have a 3A fuse in the supply before you switch it on, just in case......